What is UniProtKB?
UniProtKB. x; UniProtKB. Protein knowledgebase. UniParc. Sequence archive. Help. Help pages, FAQs, UniProtKB manual, documents, news archive and Biocuration projects. UniRef. Sequence clusters. Proteomes. Protein sets from fully sequenced genomes. Annotation systems. Systems used to automatically annotate proteins with high accuracy: UniRule ...
What is the'basket'in the UniProt KnowledgeBase?
UniProtKB is produced by the UniProt consortium. Browse the resource website Developed by the Swiss-Prot group and UniProt partners at EMBL-EBI and PIR, and supported by the SIB Swiss Institute of Bioinformatics. UniProt is an ELIXIR Core Data Resource. This resource is released under a Creative Commons Attribution International licence CC BY 4.0. What you can do with …
What is UniProtKB/TrEMBL (unreviewed)?
UniProtKB/Swiss-Prot is the expertly curated component of UniProtKB (produced by the UniProt consortium). It contains hundreds of thousands of protein descriptions, including function, domain structure, subcellular location, post-translational modifications and functionally characterized variants. 💡 UniProt is one of the most widely used protein information resources in …
What is included in the UniProtKB annotations?
UniProtKB. x; UniProtKB. Protein knowledgebase. UniParc. Sequence archive. Help. Help pages, FAQs, UniProtKB manual, documents, news archive and Biocuration projects. UniRef. Sequence clusters. Proteomes. Protein sets from fully sequenced genomes. Annotation systems. Systems used to automatically annotate proteins with high accuracy: UniRule ...
What is UniProtKB used for?
UniProtKB/Swiss-Prot is a manually annotated, non-redundant protein sequence database. It combines information extracted from scientific literature and biocurator-evaluated computational analysis. The aim of UniProtKB/Swiss-Prot is to provide all known relevant information about a particular protein.
What is UniProtKB in bioinformatics?
The Universal Protein Resource (UniProt) is a comprehensive resource for protein sequence and annotation data.02-Feb-2021
What is UniProt KB?
The UniProt Knowledgebase (UniProtKB) is the central hub for the collection of functional information on proteins, with accurate, consistent and rich annotation.28-Jan-2021
What is UniProtKB Swiss-Prot database?
UniProtKB/Swiss-Prot is the manually annotated and reviewed section of the UniProt Knowledgebase (UniProtKB). It is a high quality annotated and non-redundant protein sequence database, which brings together experimental results, computed features and scientific conclusions.
What are the components of UniProtKB?
UniProt is comprised of four major components, each optimized for different uses: the UniProt Knowledgebase, the UniProt Reference Clusters, the UniProt Archive and the UniProt Metagenomic and Environmental Sequences database.
How do I use UniProtKB?
10:0127:56A guide to UniProt for students - YouTubeYouTubeStart of suggested clipEnd of suggested clipSimply input your sequence of interest into it or any uniprot identified into the search box thenMoreSimply input your sequence of interest into it or any uniprot identified into the search box then click blast.
What is TrEMBL?
Introduction TrEMBL is a computer-annotated protein sequence database supplementing the SWISS-PROT Protein Sequence Data Bank. TrEMBL contains the translations of all coding sequences (CDS) present in the EMBL Nucleotide Sequence Database not yet integrated in SWISS-PROT.01-Jan-1999
What is uniref50?
The UniProt Reference Clusters (UniRef) provide clustered sets of sequences from the UniProt Knowledgebase (including isoforms) and selected UniParc records in order to obtain complete coverage of the sequence space at several resolutions while hiding redundant sequences (but not their descriptions) from view.30-Jun-2020
What are the differences between UniProtKB Swiss-Prot and UniProtKB TrEMBL?
UniProtKB/Swiss-Prot is manually curated which means that the information in each entry is annotated and reviewed by a curator, while the records in UniProtKB/TrEMBL are automatically generated and are enriched with automatic annotation and classification.29-Mar-2011
Is Swiss-Prot a primary database?
Hint: A primary database is one that makes information available to the public. The secondary databases take this information on sequences to then add layers to the existing DNA sequence and protein sequence data. Complete answer: SWISS PROT is a protein sequence database.
How do I access Swiss-Prot?
There are multiple sites on the Web that can access the Swiss-Prot/TrEMBL and retrieve the database. Its main sites are the ExPASy Molecular Biology website (http://www.expasy.org/) and the European Institute of Bioinformatics (EBI) website (http://www.ebi.ac.uk/swissprot/).
What is the difference between Swiss-Prot and TrEMBL?
TrEMBL consists of entries in a SWISS-PROT format that are derived from the translation of all coding sequences in the EMBL nucleotide sequence database, that are not in SWISS-PROT. Unlike SWISS-PROT entries those in TrEMBL are awaiting manual annotation.