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swiss prot protein database ppt

by Wilma McKenzie Published 3 years ago Updated 3 years ago

What is SWISS-PROT protein sequence database?

SWISS-PROT is a curated protein sequence database which strives to provide a high level of annotation (such as the description of the function of a protein, its domains structure, post-translational modifications, variants, etc.), a minimal level of redundancy and high level of integration with other databases.

Is SWISS-PROT a primary protein database?

SWISS PROT is a protein sequence database. Annotations in the database provide all the information regarding the structure and function of a particular protein along with its functions and modifications if any. The data is all primary and easily accessible.

Is SWISS-PROT A reviewed database?

SWISS-PROT database contains the protein sequences that have been carefully examined and accurately annotated in the EMBL nucleic acid sequence database.

What is UniProtKB SWISS-PROT database?

UniProtKB/Swiss-Prot is the manually annotated and reviewed section of the UniProt Knowledgebase (UniProtKB). It is a high quality annotated and non-redundant protein sequence database, which brings together experimental results, computed features and scientific conclusions.

What are the applications of SWISS-PROT?

SWISS-PROT is a curated protein sequence database which strives to provide a high level of annotations (such as the description of the function of a protein, structure of its domains, post-translational modifications, variants, etc.), a minimal level of redundancy and high level of integration with other databases.

What is PDB used for?

PDB is a very important database when it comes to the areas of structural biology. Structures in PDB have wide applications. They can be used for various studies including identification of new protein structures via in silico approaches or can be used for protein–nucleic acid interaction studies.

Is SWISS-PROT UniProt?

Swiss-Prot (created in 1986) is a high quality manually annotated and non-redundant protein sequence database, which brings together experimental results, computed features and scientific conclusions. UniProtKB/Swiss-Prot is now the reviewed section of the UniProt Knowledgebase.

What is the difference between SWISS-PROT and TrEMBL?

TrEMBL consists of entries in a SWISS-PROT format that are derived from the translation of all coding sequences in the EMBL nucleotide sequence database, that are not in SWISS-PROT. Unlike SWISS-PROT entries those in TrEMBL are awaiting manual annotation.

What is SWISS-PROT Wikipedia?

UniProtKB/Swiss-Prot is a manually annotated, non-redundant protein sequence database. It combines information extracted from scientific literature and biocurator-evaluated computational analysis.

What is PIR in bioinformatics?

The Protein Information Resource (PIR) is an integrated public resource of protein informatics that supports genomic and proteomic research and scientific discovery. PIR maintains the Protein Sequence Database (PSD), an annotated protein database containing over 283 000 sequences covering the entire taxonomic range.

Why are protein databases important?

Importance of Protein Databases Comparison between proteins or between protein families provides information about the relationship between proteins within a genome or across different species and hence offers much more information that can be obtained by studying only an isolated protein.

Is UniProt and Swiss-Prot same?

UniProtKB/TrEMBL is a computer-annotated (unreviewed) supplement to Swiss-Prot, which strives to gather all protein sequences that are not yet represented in Swiss-Prot.

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